Package index • gplate

Build plates

gp(): Make a gp object

gp_sec(): Add a section to a gp object.

Visualize

gp_plot(): Plot a gp object

gp_mini_theme(): A theme for making little in-line plots

Datasets

example_plate: A 8x12 matrix of random integers 1-10

pcr_plate: Data from a PCR experiment on a 384-well plate

plate_formats: Standard plate formats for microwell plates

protein_quant: Data from a protein quantification assay in a 96-well plate. See the "Using gp to wrangle plate data" vignette for more details

Utilities

as_gp(): Coerce object to gp

gp_serve(): Extract useful, tidy data from a gp object

gp_unserve(): Turn a tidy data.frame into a gp

gp_unravel() gp_reravel(): Turn data from 'plate form' to 'tidy form' and back

gp_excise(): Slice out a smaller gp from a gp via coordinates

wells(): Calculate wells of gp object

well_data(): Extract well data from an object

Internal utilities

new_gp(): A constructor for a gp object

arrange_by_dim(): Arrange gp well data relative to user supplied start_corner

coordinate(): Create a dimension pattern 'unit' of a section

flip_dim(): Take a set of numbers and flip them around on a number line

is_fwd(): Check if axis moves in the canonical direction

non_int_replicate(): Recycle a df a non-integer number of times

rel_dim(): Performs flip_dim if necessary

unroll_sec_dim_along_parent(): Repeat one dimension of a child section across a dimension of a parent section